Last updated
Last updated
You can access genomics data in one of the following locations:
Download via .
The for download or use within the CyVerse computing environment.
The computing environment.
Please review our .
The data is structured on both the TERRA-REF strorage (accessible via Globus and Workbench) and CyVerse Data Store infrastructures as follows:
Data derived from analysis of the raw resequencing data at the Danforth Center (version1) are available as gzipped, genotyped variant call format (gVCF) files and the final combined hapmap file.
Combined genotype calls are available in VCF format.
genomics/raw_data/ril/gbs
H5JYFBCXY_1_fastq.txt
H5JYFBCXY_2_fastq.txt
Key_ril_terra
genomics/derived_data/ril/gbs/kansas_state/version1/imp_TERRA_RIL_SNP.vcf
Raw data are in bzip2 FASTQ format, one per read pair (*_R1.fastq.bz2 and *_R2.fastq.bz2). 384 samples are available. For a list of the lines sequenced, see the .
Raw data are in gzip FASTQ format. 768 samples are available. For a list of lines sequenced, see the .