TERRA-REF Documentation
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  • Introduction
  • Data Sources
  • Software
  • Scientific Objectives and Experimental Design
    • Protocols
      • Controlled Environment Protocols
      • Manual Field Data Protocols
      • Phenotractor Protocols
      • Sensor Calibration
      • Template Protocol
      • UAV Protocols
    • Experimental Design
      • Experimental Design Danforth
        • Sorghum Lines Danforth
      • Experimental Design Genomics
        • Sorghum Lines Genomics Year 1
        • Sorghum Lines Genomics Year 1 (continued)
        • Sorghum Lines Genomics Year 2
      • Experimental Design MAC
  • User Manual
    • What Data is Available
    • Data Products
      • Environmental conditions
      • Fluorescence intensity imaging
      • Genomics data
      • Geospatial information
      • Hyperspectral imaging data
      • Infrared heat imaging data
      • Multispectral imaging data
      • Meteorological data
      • Phenotype data
      • Point Cloud Data
    • How to Access Data
      • Using Clowder (Sensor and Genoomics data)
      • Using Globus (Sensor and Genomics data)
      • Using BETYdb (trait data, experimental metadata)
        • Accessing BETYdb via ArcMap and other GIS software
      • Using CoGe (Genomics)
      • Using CyVerse (Genomics)
      • Using Analysis Workbench (all data)
    • Data Use Policy
    • Manuscripts and Authorship Guidelines
    • Release / reprocessing schedule
  • Technical Documentation
    • Data Standards
      • Existing Data Standards
      • Agronomic and Phenotype Data Standards
      • Genomic Data Standards
      • Sensor Data Standards
      • Data Standards Committee
    • Directory Structure
    • Data Storage
    • Data Transfer
    • Data Processing Pipeline
      • Geospatial Time Series Structure
    • Data Backup
    • Data Collection
    • Data Product Creation
      • Genomic Data
      • Hyperspectral Data
    • Quality Assurance and Quality Control
    • Systems Configuration
  • Developer Manual
    • Submitting data to Clowder
    • Submitting data to BETYdb
    • Submitting Data to CoGe
    • Developing Clowder Extractors
  • Tutorials
  • Appendix
    • Code of Conduct
    • Collaboration Tools
    • Glossary
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  1. Technical Documentation

Systems Configuration

PreviousQuality Assurance and Quality ControlNextDeveloper Manual

Last updated 5 years ago

The software that makes up the terraref system runs on different VM's. Some of the services leveraged by the systems runs in a replicated mode so that the overall system will not stop working if any of the underlying VM's goes down.

Following is the overview of the system as it is running now:

  • terraref is the frontend for everything, runs nginx

  • terra-geodashboard runs the geodashboard software, connected to terra-clowder

  • terra-thredds runs the thredds server (experimental), connected to roger filesystem (using NFS moutn)

  • terra-es-[123] run elasticsearch 2.4 and for a cluster

  • terra-mongo-[123] run mongo 3.6 in a replicated cluster, terra-mongo-3 is an arbiter and does not hold any data

  • terra-postgres runs postgres 9.5

terra-clowder runs the data management system clowder, connected to terra-mongo-[123], terra-es-[123], terra-postgres and the (using NFS mount)

NCSA storage condo